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About James Berleman

My research interests have focused on understanding microbial community interactions from a bottom-up perspective with the overall goal of determining how cell-cell interactions drive community dynamics, including:

-Predatory behavior, and the impact of keystone species within microbial communities

-Understanding sub-cellular outer membrane vesicles: delivery, cargo, impact.   

-Cell-cell signaling and resistance to predatory and antibiotic threats

My research approach combines molecular genetics with novel multi-scale, multi-modal imaging techniques and biochemistry to examine microbial interactions, such as:

-Mass Spectrometry imaging (SIMS, nanoDESI)      

-3D Electron microscopy (FIB/SEM)

-stamp/extraction imaging of metabolites (NIMS)

My research interest is in understanding how cells interact with each other. Myxococcus xanthus cells are uniquely interactive bacteria, working together to form multicellular structures, yet also dangerous to other bacteria as they lyse cells of other species, such as E. coli, and grow on the released macromolecules. Current projects: 1) Mapping microbial interfaces. We use Nano Initiator Mass Spectrometry (NIMS) to construct chemical maps of bacterial interactions on surfaces. Bacteria represent a broad range of biological and chemical diversity. Our ability to understand and harness this diversity is critical for studies ranging from biofuel production to new pharmaceuticals (In collaboration with Trent Northen and Musahid Ahmed at Lawrence Berkeley National Lab). 2) Social cooperation in bacteria. We our analyzing the ability of M. xanthus cells to work together in Social motility. Motility on soft surfaces requires Type IV pili, similar to twitching motility in Pseudomonas aeruginosa, but also requires a high cell density. We are examining the extracellular components required through genetic and biochemical analysis of the transition from single cells to a cohesive multicellular unit (In collaboration with Manfred Auer at http://www.lbl.gov/Lawrence Berkeley National Lab). 3) Social antagonism in bacteria. M. xanthus cells lyse bacteria of other species through a mechanism that is distinct from other soil microbes such as Streptomyces species. The mechanism remains largely uncharacterized but requires cell contact and may depend on targeted delivery of antibiotic compounds.

Positions

Present Faculty Member, Saint Mary's College of California Biology
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Present Faculty Member, Saint Mary's College of California School of Science
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Disciplines


Research Interests


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Courses

  • Collegiate Seminar
  • Experiential Biology lab
  • Introduction to Organismal and Evolutionary Biology
  • Introduction to Molecular Biology and Biochemistry
  • Zymology (The Science of Delicious)
  • Microbiology
  • Genetics

Education

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2004 PhD Microbiology, Indiana University - Bloomington
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1999 BS Microbiology, University of Illinois at Urbana-Champaign
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Contact Information

Office: Brousseau Hall - 212

Email:


Honors, Awards, & Grants (6)

In the News (1)

Publications (24)