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Article
Identification of a Small Molecule Inhibitor of the Aminoglycoside 6'- N -acetyltransferase Type Ib [AAC(6')-Ib] Using Mixture-Based Combinatorial Libraries
International Journal of Antimicrobial Agents
  • Tung Tran, California State University - Fullerton
  • Kevin Chiem, California State University - Fullerton
  • Saumya Jani, California State University - Fullerton
  • Brock A. Arivett, Middle Tennessee State University
  • David L. Lin, California State University - Fullerton
  • Rupali Lad, California State University - Fullerton
  • Veronica Jimenez, California State University - Fullerton
  • Mary B. Farone, Middle Tennessee State University
  • Ginamarie Debevac, Torrey Pines Institute for Molecular Studies
  • Radleigh Santos, Torrey Pines Institute for Molecular Studies
  • Marc Giulianotti, Torrey Pines Institute for Molecular Studies
  • Clemencia Pinilla, Torrey Pines Institute for Molecular Studies
  • Marcelo E. Tolmasky, California State University - Fullerton
Document Type
Article
Publication Date
4-30-2018
Keywords
  • Acetyltransferase,
  • Aminoglycoside,
  • Enterobacteriaceae,
  • ESKAPE,
  • Hospital infection,
  • Combinatorial libraries
Abstract

The aminoglycoside, 6′-N-acetyltransferase type Ib [AAC(6')-Ib] is the most widely distributed enzyme among AAC(6')-I-producing Gram-negative pathogens and confers resistance to clinically relevant aminoglycosides, including amikacin. This enzyme is therefore an ideal target for enzymatic inhibitors that could overcome resistance to aminoglycosides. The search for inhibitors was carried out using mixture-based combinatorial libraries, the scaffold ranking approach, and the positional scanning strategy. A library with high inhibitory activity had pyrrolidine pentamine scaffold and was selected for further analysis. This library contained 738,192 compounds with functionalities derived from 26 different amino acids (R1, R2 and R3) and 42 different carboxylic acids (R4) in four R–group functionalities. The most active compounds all contained S-phenyl (R1 and R3) and S-hydromethyl (R2) functionalities at three locations and differed at the R4 position. The compound containing 3-phenylbutyl at R4 (compound 206) was a robust enzymatic inhibitor in vitro, in combination with amikacin it potentiated the inhibition of growth of three resistant bacteria in culture, and it improved survival when used as treatment of Galleria mellonella infected with aac(6')-Ib -harboring Klebsiella pneumoniae and Acinetobacter baumannii strains.

Comments

©2018 Elsevier B.V. and International Society of Chemotherapy

Additional Comments
National Institute of Allergy and Infectious Diseases Public Health Service Grant #: 2R15AI047115-04
DOI
10.1016/j.ijantimicag.2018.01.019
Citation Information
Tung Tran, Kevin Chiem, Saumya Jani, Brock A. Arivett, et al.. "Identification of a Small Molecule Inhibitor of the Aminoglycoside 6'- N -acetyltransferase Type Ib [AAC(6')-Ib] Using Mixture-Based Combinatorial Libraries" International Journal of Antimicrobial Agents Vol. 51 Iss. 5 (2018) p. 752 - 761 ISSN: 0924-8579
Available at: http://works.bepress.com/radleigh-santos/22/