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Article
Crystallography Open Database (COD): an open-access collection of crystal structures and platform for world-wide collaboration
Nucleic Acids Research
  • Saulius Gražulis, Vilnius University
  • Adriana Daškevič, Vilnius University
  • Andrius Merkys, Vilnius University
  • Daniel Chateigner, University of Caen Lower Normandy
  • Luca Lutterotti, University of Trento
  • Miguel Quirós, University of Granada
  • Nadezhda R. Serebryanaya, Technological Institute of Superhard and New Carbon Materials
  • Peter Moeck, Portland State University
  • Robert T. Downs, University of Arizona
  • Armel Le Bail, Université du Maine
Document Type
Article
Publication Date
11-8-2012
Subjects
  • Crystallography -- Databases,
  • Open access publishing
Disciplines
Abstract

Using an open-access distribution model, the Crystallography Open Database (COD, http://www.crystallography.net) collects all known 'small molecule / small to medium sized unit cell' crystal structures and makes them available freely on the Internet. As of today, the COD has aggregated ~150,000 structures, offering basic search capabilities and the possibility to download the whole database, or parts thereof using a variety of standard open communication protocols. A newly developed website provides capabilities for all registered users to deposit published and so far unpublished structures as personal communications or pre-publication depositions. Such a setup enables extension of the COD database by many users simultaneously. This increases the possibilities for growth of the COD database, and is the first step towards establishing a world wide Internet-based collaborative platform dedicated to the collection and curation of structural knowledge.

Description

Copyright The Author(s) 2011. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/ by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

DOI
10.1093/nar/gkr900
Persistent Identifier
http://archives.pdx.edu/ds/psu/9313
Citation Information
Gražulis, S., Daškevič, A., Merkys, A., Chateigner, D., Lutterotti, L., Quirós, M., & ... Le Bail, A. (2012). Crystallography Open Database (COD): an open-access collection of crystal structures and platform for world-wide collaboration.