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Prospects for resolving chemical structure by atomic force microscopy: a first principles study
Langmuir (2010)
  • Chun-Sheng Guo, Department of Physics and Materials Science, City University of Hong Kong, Hong Kong SAR, China
  • Michel A. Van Hove, Department of Physics and Materials Science, City University of Hong Kong, Hong Kong SAR, China
  • Rui-Qin Zhang, Department of Physics and Materials Science, City University of Hong Kong, Hong Kong SAR, China
  • Christian Minot, Department of Physics and Materials Science, City University of Hong Kong, Hong Kong SAR, China
Abstract
In a recent paper, the chemical structure of a molecule was resolved by means of atomic force microscopy (AFM): using a metal tip terminated in a CO molecule, the authors could image the internal bonding arrangement of a pentacene molecule with remarkable spatial resolution (notably better than with other tip terminations), as verified by their first-principles calculations. Here we further explore with first-principles calculations the mechanisms, applicability and capabilities of this approach for a wider range of situations, by varying the imaged molecule and the tip beyond the experimental cases. In our simulations, a high atomic resolution is found to be dominated by the electronic structure of the last two atoms on the tip apex which are set perpendicularly to the sample molecule. For example, tips terminated in CH4 or pentacene itself (both having a C-H apex) yield similar images, while tips terminated in O2 or CO give quite different images. While using a CO-terminated tip successfully resolves the chemical structure of pentacene and of other extended planar networks based on C6 rings, this tip fails to resolve the structures of benzene (with its single C6 ring) or non-planar C6 networks, such as C60 or small-diameter carbon nanotubes. Defects (such as N substitution for a C-H group) were also found to significantly influence the image resolution. Our findings indicate that further application of this approach requires, for each sample, careful selection of a suitable “imaging” molecule as tip termination.
Disciplines
Publication Date
2010
DOI
10.1021/la101317s
Citation Information
Chun-Sheng Guo, Michel A. Van Hove, Rui-Qin Zhang and Christian Minot. "Prospects for resolving chemical structure by atomic force microscopy: a first principles study" Langmuir Vol. 26 Iss. 21 (2010) p. 16271 - 16277 ISSN: 15205827
Available at: http://works.bepress.com/mavanhove/97/