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Presentation
Cross Correlation of Transcription Factor Binding and RNA Synthesis in Saccharomyces cerevisiae by 3D Orbital Tracking
Idaho Conference on Undergraduate Research
  • Micah Buckmiller, Boise State University
  • Tineke Lenstra, National Cancer Institute
  • Matthew L. Ferguson, (Mentor), Boise State University
Abstract

This project utilized 3D orbital tracking and a newly developed fluorescent labeling strategy that allows simultaneous visualization of pre-mRNA and transcription factors inside of living yeast cells. This allowed us to follow the fate of individual eukaryotic pre-mRNA molecules as they undergo transcription in real time and enable complete kinetic characterization of the initiation, elongation and release of individual RNA molecules as well as single molecule temporal correlation of transcription factor binding to DNA. In previous work, due to the rapid photobleaching of cells, 10-20 measurements were averaged together to determine transcriptional kinetics. With 3D orbital tracking, the information garnered in three previous experiments on two separate microscopes will be available in a single cell measurement at a 100x times faster sampling rate.

Comments
Poster #W18
Citation Information
Micah Buckmiller, Tineke Lenstra and Matthew L. Ferguson. "Cross Correlation of Transcription Factor Binding and RNA Synthesis in Saccharomyces cerevisiae by 3D Orbital Tracking"
Available at: http://works.bepress.com/matthew_ferguson/20/