Skip to main content
Unpublished Paper
Shrunken p-values for assessing differential expression, with applications to genomic data analysis
The University of Michigan Department of Biostatistics Working Paper Series
  • Debashis Ghosh, University of Michigan
Date of this Version
8-12-2005
Abstract
n many scientific problems involving high-throughput technology, inference must be made involving several hundreds or thousands of hypotheses. Recent attention has focused on how to address the multiple testing issue; much focus has been devoted towards use of the false discovery rate. In this article, we consider an alternative estimation procedure titled shrunken p-values for assessing differential expression (SPADE). The estimators are motivated by risk considerations from decision theory and lead to a completely new method for adjustment in the multiple testing problem. Some theoretical results are outlined. The proposed methodology is illustrated using simulation studies and with application to data from a prostate cancer gene expression profiling study.
Disciplines
Citation Information
Debashis Ghosh. "Shrunken p-values for assessing differential expression, with applications to genomic data analysis" (2005)
Available at: http://works.bepress.com/debashis_ghosh/12/