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Genetic and Genomic Characterization of 462 Melanoma Patient-Derived Xenografts, Tumor Biopsies, and Cell Lines.
Wills Eye Hospital Papers
  • Bradley Garman, University of Pennsylvania
  • Ioannis N. Anastopoulos, University of Pennsylvania
  • Clemens Krepler, The Wistar Institute
  • Patricia Brafford, The Wistar Institute
  • Katrin Sproesser, The Wistar Institute
  • Yuchao Jiang, University of Pennsylvania
  • Bradley Wubbenhorst, University of Pennsylvania
  • Ravi Amaravadi, University of Pennsylvania
  • Joseph Bennett, Christiana Care Health System
  • Marilda Beqiri, The Wistar Institute
  • David Elder, University of Pennsylvania
  • Keith T. Flaherty, Massachusetts General Hospital
  • Dennie T. Frederick, Massachusetts General Hospital
  • Tara C. Gangadhar, University of Pennsylvania
  • Michael Guarino, Christiana Care Health System
  • David Hoon, Providence Saint John's Health Center
  • Giorgos Karakousis, University of Pennsylvania
  • Qin Liu, The Wistar Institute
  • Nandita Mitra, University of Pennsylvania
  • Nicholas J. Petrelli, Christiana Care Health System
  • Lynn Schuchter, University of Pennsylvania,
  • Batool Shannan, The Wistar Institute
  • Carol L. Shields, Thomas Jefferson University
  • Jennifer Wargo, University of Texas MD Anderson Cancer Center
  • Brandon Wenz, University of Pennsylvania,
  • Melissa A. Wilson, NYU School of Medicine, NYU Langone Medical Center
  • Min Xiao, The Wistar Institute
  • Wei Xu, University of Pennsylvania
  • Xaiowei Xu, University of Pennsylvania
  • Xiangfan Yin, The Wistar Institute
  • Nancy R. Zhang, University of Pennsylvania,
  • Michael A. Davies, University of Texas MD Anderson Cancer Center
  • Meenhard Herlyn, The Wistar Institute
  • Katherine L. Nathanson, University of Pennsylvania,
Document Type
Article
Publication Date
11-14-2017
Comments

This article has been peer reviewed. It is the author’s final published version in Cell Reports

Volume 21, Issue 7, November 2017, Pages 1936-1952

The published version is available at DOI: 10.1016/j.celrep.2017.10.052. Copyright © Garman et al.

Abstract

Tumor-sequencing studies have revealed the widespread genetic diversity of melanoma. Sequencing of 108 genes previously implicated in melanomagenesis was performed on 462 patient-derived xenografts (PDXs), cell lines, and tumors to identify mutational and copy number aberrations. Samples came from 371 unique individuals: 263 were naive to treatment, and 108 were previously treated with targeted therapy (34), immunotherapy (54), or both (20). Models of all previously reported major melanoma subtypes (BRAF, NRAS, NF1, KIT, and WT/WT/WT) were identified. Multiple minor melanoma subtypes were also recapitulated, including melanomas with multiple activating mutations in the MAPK-signaling pathway and chromatin-remodeling gene mutations. These well-characterized melanoma PDXs and cell lines can be used not only as reagents for a large array of biological studies but also as pre-clinical models to facilitate drug development.

Creative Commons License
Creative Commons Attribution-Noncommercial-No Derivative Works 4.0
PubMed ID
29141224
Citation Information
Bradley Garman, Ioannis N. Anastopoulos, Clemens Krepler, Patricia Brafford, et al.. "Genetic and Genomic Characterization of 462 Melanoma Patient-Derived Xenografts, Tumor Biopsies, and Cell Lines." (2017)
Available at: http://works.bepress.com/dave-hoon/321/