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Elementary Mode Analysis: A Useful Metabolic Pathway Analysis Tool for Reprograming Microbial Metabolic Pathways
(2012)
  • Cong T Trinh, University of Tennessee - Knoxville
  • Adam R Thompson, University of Tennessee - Knoxville
Abstract

Elementary mode analysis is a useful metabolic pathway analysis tool to characterize cellular metabolism. It can identify all feasible metabolic pathways known as elementary modes that are inherent to a metabolic network. Each elementary mode contains a minimal and unique set of enzymatic reactions that can support cellular functions at steady state. Knowledge of all these pathway options enables systematic characterization of cellular phenotypes, analysis of metabolic network properties (e.g. structure, regulation, robustness, and fragility), phenotypic behavior discovery, and rational strain design for metabolic engineering application. This chapter focuses on the application of elementary mode analysis to reprogram microbial metabolic pathways for rational strain design and the metabolic pathway evolution of designed strains.

Publication Date
2012
Editor
Xiaoyuan Wang, Jian Chen, Peter Quinn
Publisher
Springer Netherlands
ISBN
978-94-007-5055-5
Citation Information
Cong T Trinh and Adam R Thompson. Elementary Mode Analysis: A Useful Metabolic Pathway Analysis Tool for Reprograming Microbial Metabolic Pathways. Vol. 64 (2012)
Available at: http://works.bepress.com/ctrinh/14/