Skip to main content
Article
Bacterial Community in Ancient Siberian Permafrost as Characterized by Culture and Culture-Independent Methods
Astrobiology
  • Craig L. Moyer, Western Washington University
Document Type
Article
Publication Date
1-1-2006
Keywords
  • psychrotroph,
  • arctic,
  • arthrobacter,
  • psychrobacter,
  • exiguobacterium,
  • 16S rRNA phylogeny
Disciplines
Abstract

The microbial composition of ancient permafrost sediments from the Kolyma lowland of Northeast Eurasia was examined through culture and culture-independent approaches. These sediments have been continuously frozen for 5,000 to 2–3 million years. A total of 265 Bacteria 16S rRNA gene sequences were amplified from the permafrost total-community genomic DNA and screened by amplified ribosomal 16S rRNA restriction analysis. Members of three major lineages were found: gamma-Proteobacteria (mostly Xanthomonadaceae), Actinobacteria, and Firmicutes. We also determined partial 16S rRNA gene sequences of 49 isolates from a collection of 462 aerobes isolated from these sediments. The bacteria included Actinomycetales (Arthrobacter and Microbacteriaceae); followed by the Firmicutes (Exiguobacterium and Planomicrobium); the Bacteroidetes (Flavobacterium); the gamma-Proteobacteria (Psychrobacter); and the alpha-Proteobacteria (Sphingomonas). Both culture and culture-independent approaches showed the presence of high and low G+C Gram-positive bacteria and gamma-Proteobacteria. Some of the 16S rRNA gene sequences of environmental clones matched those of Arthrobacter isolates. Two-thirds of the isolates grew at –2.5°C, indicating that they are psychroactive, and all are closely related to phylogenetic groups with strains from other cold environments, mostly commonly from Antarctica. The culturable and non-culturable microorganisms found in the terrestrial permafrost provide a prototype for possible life on the cryogenic planets of the Solar System.

Subjects - Topical (LCSH)
Bacteria--Eurasia--Identification; Permafrost--Microbiology--Eurasia; Bacterial communities--Eurasia; Cultures (Biology)--Eurasia; Exobiology
Geographic Coverage
Eurasia
Genre/Form
articles
Type
Text
Language
English
Format
application/pdf
Citation Information
Moyer, Craig L. "Bacterial Community in Ancient Siberian Permafrost as Characterized by Culture and Culture-Independent Methods." Astrobiology 6.3 (2006): 400-414.