"PathologyXGrid Implementation for the InterProScan Bioinformatics Software" by Cody K Bumgardner

Selected Works of Cody Bumgardner

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Presentation

PathologyXGrid Implementation for the InterProScan Bioinformatics Software

UT-ORNL-KBRIN Bioinformatics Summit (2006)

Cody K Bumgardner, University of Kentucky

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Abstract

SoftwareInterProScan is an essential step in the Epichloëfestucae genome project’s pipeline. Complete determination of the genome sequence for Epichloëfestucae, requires substantial programmatic and computing efforts. Due to the running time requirements the computational volume of some of its subtasks exceed the power of a traditional single processor computation and high performance approaches, such as grid computing, are needed.

Keywords

Blast Interproscan Bioinformatics

Disciplines

Biomedical,
Computational Engineering,
Computer Engineering,
Electrical and Electronics and
Systems and Communications

Publication Date

April 21, 2006

Citation Information

Cody K Bumgardner. "PathologyXGrid Implementation for the InterProScan Bioinformatics Software" UT-ORNL-KBRIN Bioinformatics Summit (2006)
Available at: http://works.bepress.com/cody/1/