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Article
Clostridium amazonense sp. nov. an obliqately anaerobic bacterium isolated from a remote Amazonian community in Peru
Anaerobe
  • Lindsey O'Neal, University of Oklahoma
  • Alexandra J. Obregon-Tito, University of Oklahoma
  • Raul Y. Tito, University of Oklahoma
  • Andrew T. Ozga, University of Oklahoma
  • Susan I. Polo, University of Oklahoma
  • Cecil M. Lewis, Jr., University of Oklahoma
  • Paul Lawson, University of Oklahoma
Document Type
Article
Publication Date
10-1-2015
Keywords
  • Clostridium amazonense sp. nov.,
  • Indigenous community,
  • 16S rRNA phylogeny,
  • Taxonomy
Abstract

A strictly anaerobic Gram-stain positive, spore-forming, rod-shaped bacterium designated NE08VT, was isolated from a fecal sample of an individual residing in a remote Amazonian community in Peru. Phylogenetic analysis based on the 16S rRNA gene sequence showed the organism belonged to the genus Clostridium and is most closely related to Clostridium vulturis (97.4% sequence similarity) and was further characterized using biochemical and chemotaxonomic methods. The major cellular fatty acids were anteiso C13:0 and C16:0 with a genomic DNA G + C content of 31.6 mol%. Fermentation products during growth with PYG were acetate and butyrate. Based on phylogenetic, phenotypic and chemotaxonomic information, strain NE08V was identified as representing a novel species of the genus Clostridium, for which the name Clostridium amazonense sp. nov. is proposed. The type strain is NE08VT (DSM 23598T = CCUG 59712T).

Comments

The 16S rRNA sequence of strain NE08VT (DSM 23598T = CCUG 59712T) have been deposited in GenBank under accession number KP281434.

ORCID ID
0000-0003-4540-7106
ResearcherID
D-1147-2018
DOI
10.1016/j.anaerobe.2015.06.005
Citation Information
Lindsey O'Neal, Alexandra J. Obregon-Tito, Raul Y. Tito, Andrew T. Ozga, et al.. "Clostridium amazonense sp. nov. an obliqately anaerobic bacterium isolated from a remote Amazonian community in Peru" Anaerobe Vol. 35 Iss. Part B (2015) p. 33 - 37 ISSN: 1075-9964
Available at: http://works.bepress.com/andrew-ozga/10/