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A New Colorimetric Assay for Methionyl Aminopeptidases: Examination of the Binding of a New Class of Pseudopeptide Analog Inhibitors
Analytical Biochemistry: Methods in the Biological Sciences
  • Sanghamitra Mitra, Utah State University
  • Anna M. Dygas-Holz, Utah State University
  • Jiri Jiracek, Academy of Sciences of the Czech Republic
  • Miroslava Zertova, Academy of Sciences of the Czech Republic
  • Lenka Zakova, Academy of Sciences of the Czech Republic
  • Richard C. Holz, Marquette University
Document Type
Article
Publication Date
10-1-2006
Disciplines
Abstract

A direct and convenient spectrophotometric assay has been developed for methionine aminopeptidases (MetAPs). The method employs the hydrolysis of a substrate that is a methionyl analogue of p-nitroaniline (l-Met-p-NA), which releases the chromogenic product p-nitroaniline. This chromogenic product can be monitored continuously using a UV–Vis spectrophotometer set at 405 nm. The assay was tested with the type I MetAP from Escherichia coli (EcMetAP-I) and the type II MetAP from Pyrococcus furiosus (PfMetAP-II). Using l-Met-p-NA, the kinetic constants kcat and Km were determined for EcMetAP-I and PfMetAP-II and were compared with those obtained with a “standard” high-performance liquid chromatography (HPLC) discontinuous assay. The assay has also been used to determine the temperature dependence of the kinetic constant kcat for PfMetAP-II as well as to screen two novel pseudopeptide inhibitors of MetAPs. The results demonstrate that l-Met-p-NA provides a fast, convenient, and effective substrate for both type I and type II MetAPs and that this substrate can be used to quickly screen inhibitors of MetAPs.

Comments

Accepted version. Analytical Biochemical: Methods in the Biological Sciences, Vol. 357, No. 1 (October 1, 2006): 43-49. DOI. © 2006 Elsevier Inc. Used with permission.

Richard Holz was affiliated with the Utah State University and the Loyola University of Chicago at the time of publication.

Citation Information
Sanghamitra Mitra, Anna M. Dygas-Holz, Jiri Jiracek, Miroslava Zertova, et al.. "A New Colorimetric Assay for Methionyl Aminopeptidases: Examination of the Binding of a New Class of Pseudopeptide Analog Inhibitors" Analytical Biochemistry: Methods in the Biological Sciences (2006) ISSN: 0003-2697
Available at: http://works.bepress.com/richard_holz/92/