Handout
FASTQC Analysis & HISAT Alignments Using CyVerse (part 2)
Bio 481 Genomics
(2018)
Description
Part 2 of this in class exercise uses CyVerse Discovery Environment (DE) for the following:
- view the output files of FastQC analysis
- create custom data tracks from HISAT alignment files for visualization in the UCSC Genome Browser
Keywords
- FastQC,
- HISAT,
- UCSC Genome Browser,
- CyVerse,
- RNA-seq,
- metagenomics
Disciplines
Publication Date
November, 2018
Citation Information
Ray A Enke. "FASTQC Analysis & HISAT Alignments Using CyVerse (part 2)" Bio 481 Genomics (2018) Available at: http://works.bepress.com/raymond_enke/105/
Creative Commons license
This work is licensed under a Creative Commons CC_BY-SA International License.