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grainSAGE - A database system for the management and analysis of SAGE tag sequences

Giovanni M. Cordeiro, Southern Cross University
Daniel Barbary, Southern Cross University
Peter C. Bundock, Southern Cross University
Robert J. Henry, Southern Cross University

Abstract

We have developed grainSAGE, a data warehousing facility to store and analyse large sample sets of tag sequences derived from Serial Analysis of Gene Expression (SAGE) for wheat and barley grain. Expression profiles of specific tag sequences across multiple time point libraries are visualised graphically with SWF.

Suggested Citation

Cordeiro, GM, Barbary, D, Bundock, PC & Henry, RJ 2005, 'grainSAGE - A database system for the management and analysis of SAGE tag sequences', in HV Jagadish (ed.), Proceedings of the 13th international conference on intelligent systems for molecular biology, Dertoit, Michigan, USA, 25-29 June, Oxford University Press, Oxford, UK.

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