Ms Frances Eliott BA(NE) 

Frances is part of CRC for Sugar Industry Innovation through Biotechnology and is working
on the development of single nucleotide polymorphisms (SNP) markers as a tool for
sugarcane genotyping and genome analysis. In previous work at the Centre, Frances was
involved in the CRC for Sustainable Forestry working on hybrid pine verification and
identifying candidate genes for wood quality. 

In addition to her work in the CRC, Frances is a PhD candidate working on the
reproductive biology and genetic distinction in the plant genus Davidsonia (Cunoniaceae).
Her studies aim to analyse the phylogenetic relationship between the 3 species in the
genus, and also to elucidate the genetic diversity within and between populations of the
2 endangered species D. jerseyana and D. johnsonii.

Journal articles

Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing (with Peter C. Bundock, Gary A. Ablett, Adam D. Benson, Rosanne E. Casu, Karen S. Aitken, and Robert J. Henry), Plant Biotechnology Journal (2009)
Discovering single nucleotide polymorphisms (SNPs) in specific genes in a heterozygous polyploid plant species, such...
 
An optimised ecotilling protocol for polyploids or pooled samples using a capillary electrophoresis system (with Giovanni M. Cordeiro and Robert J. Henry), Analytical Biochemistry (2006)
 
Characterisation of single nucleotide polymorphisms in sugarcane EST’s (with Giovanni M. Cordeiro, C Lynne McIntyre, Rosanne E. Casu, and Robert J. Henry), Theoretical and Applied Genetics (2006)

Commercial sugarcane cultivars (Saccharum spp. hybrids) are both polyploid and aneuploid with chromosome numbers in...

 
The identification and characterization of alleles of sucrose phosphate synthase gene family III in sugarcane (with C Lynne McIntyre, Mark Jackson, Giovanni M. Cordeiro, Ouzi Amouyal, Robert J. Henry, Rosanne E. Casu, S Hermann, and Karen S. Aitken), Molecular Breeding (2006)

Little is known about the extent of allelic diversity of genes in the complex polyploid,...

 
Verification of interspecific pine hybrids using paternally inherited chloroplast microsatellites (with Mervyn J. Shepherd and Robert J. Henry), Forest Genetics (2006)
Pollen contamination continues to be a problem for many operational controlled-pollination programs for hybrid trees....
 

Book chapters

SNP discovery by ecotilling using capillary electrophoresis (with Giovanni M. Cordeiro, Peter C. Bundock, and Robert J. Henry), Plant genotyping II: SNP technology (2008)
 
Sugarcane (with Giovanni M. Cordeiro, Ouzi Amouyal, and Robert J. Henry), Pulses, Sugar and Tuber Crops (Genome Mapping and Molecular Breeding in Plants) (2007)
 

Conference publications

Using Mass Spectrometry (Sequenom MALDI-TOF) to genotype sugarcane (with Peter C. Bundock, Peter Eggler, Stirling Bowen, and Robert J. Henry), Australian Society of Sugar Cane Technologists (ASSCT) Conference, 29 April - 2 May (2008)

DNA markers of various kinds (AFLPs, SSRs, SNPs etc.) are being used for many crop...

 
Personalised plant genetic analysis (with Daniel LE Waters, Julie A. Pattemore, Peter C. Bundock, Nicole F. Rice, and Robert J. Henry), 58th Australian Cereal Chemistry Conference (2008)
Individual people respond to drugs differently in a genotype dependant manner. One of the key...
 
Genotyping of single nucleotide polymorphisms in sugarcane using mass spectrometry and CEL I polymorphism detection (with Peter C. Bundock, Giovanni M. Cordeiro, and Robert J. Henry), International Plant and Animal Genome Conference XV, International Consortium of Sugar Biotechnology Workshop, 13-17 January (2007)

Genetic linkage maps of sugarcane have to date been largely based on one or a...

 

PDF

Methods for SNP identification and analysis in the sugarcane genome (with Giovanni M. Cordeiro, C Lynne McIntyre, and Robert J. Henry), Tropical Crop Biotechnology Conference (2006)
The sugarcane genome poses the challenge of being highly polyploid and requiring ingenuity to overcome...
 
SCAMinG an efficient high through put approach to discovery and analysis of SNP for genotyping of agricultural and food species (with Giovanni M. Cordeiro, Nicole F. Rice, Daniel LE Waters, Stirling Bowen, Stephen D. Williams, and Robert J. Henry), Unlocking the Potential of Agricultural Biotechnology, Agricultural Biotechnology International Conference (2006)