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Virtual Clusters for Parallel Computing Education (with Richard Brown, Eric Biggers, Malcolm Kane, Devry Lin, and Maura Warner), Proceedings of the 42nd ACM technical symposium on Computer science education, SIGCSE 12. (2012)

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Modules in Community: Injecting More Parallelism Into Computer Science Curricula (with Richard Brown), Proceedings of the ACM SIGCSE Technical Symposium on Computer Science Education (SIGCSE 2011) (2011)

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WebMapReduce: An accessible and adaptable tool for teaching map-reduce computing (with Richard Brown, Patrick Garrity, and Timothy Yates), Proceedings of the ACM SIGCSE Technical Symposium on Computer Science Education (SIGCSE 2011) (2011)

Early and often: Bringing more parallelism into undergraduate Computer Science (with et al), SPLASH 201 Workshop on Curricula for Concurrency and Parallelism (2010)

Towards a community of Computer Science educators who teach more parallelism (with Peter Hinsbeeck and Richard Brown), SPLASH 201 Workshop on Curricula for Concurrency and Parallelism (2010)

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Strategies for Preparing Computer Science Students for the Multicore World (with et al), Proceedings of 15th Annual Conference on Innovation and Technology in Computer Science Education (ITiCSE 2010) (2010)

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The Genomics Education Partnership: Successful Integration of Research into Laboratory Classes at a Diverse Group of Undergraduate Institutions (with et al), CBE Life Sciences Education (2010)

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Data Exploration Tools for the Gene Ontology Database (with Paulo Casaes, Getiria Onsongo, Lisa Lesnett, Erla Osk Petursdottir, Edward Ko Donkor, Dennis Tkach, and Michael Cosimini), Bioinformatics (2004)

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Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant (with et al), BMC Genomics (2004)

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TableView: portable genomic data visualization (with et al), Bioinformatics (2003)

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Using Scienti (with P. Wagner and J.V. Carlis), Proceedings of the 34th SIGCSE Technical Symposium on Computer Science Education (SIGCSE) (2003)

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A compilation of soybean ESTs: generation and analysis (with R. Schoemaker and et al), Genome (2002)

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MetaFam: a unified classification of protein families. II. Schema and query capabilities (with K. Silverstein and et al), Bioinformatics (2001)

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MetaFam: a unified classification of protein families I. Overview and Statistics (with K. Silverstein and et al), Bioinformatics (2001)

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The MetaFam Server: a comprehensive protein family resource (with K. Silverstein and et al), Nucleic Acids Research (2001)