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A Bayesian approach to sample size determination for studies designed to evaluate continuous medical tests

Dunlei Cheng, Baylor Health Care System
Adam J. Branscum, University of Kentucky
James D. Stamey, Baylor University

Abstract

We develop a Bayesian approach to sample size and power calculations for cross-sectional studies that are designed to evaluate and compare continuous medical tests. For studies that involve one test or two conditionally independent or dependent tests, we present methods that are applicable when the true disease status of sampled individuals will be available and when it will not. Within a hypothesis testing framework, we consider the goal of demonstrating that a medical test has area under the receiver operating characteristic (ROC) curve that exceeds a minimum acceptable level or another relevant threshold, and the goals of establishing the superiority or equivalence of one test relative to another. A Bayesian average power criterion is used to determine a sample size that will yield high posterior probability, on average, of a future study correctly deciding in favor of these goals. The impacts on Bayesian average power of prior distributions, the proportion of diseased subjects in the study, and correlation among tests are investigated through simulation. The computational algorithm we develop involves simulating multiple data sets that are fit with Bayesian models using Gibbs sampling, and is executed by using WinBUGS in tandem with R.

Suggested Citation

Dunlei Cheng, Adam J. Branscum, and James D. Stamey. "A Bayesian approach to sample size determination for studies designed to evaluate continuous medical tests" Computatioanl Statistics and Data Analysis 54 (2010): 298-307.
Available at: http://works.bepress.com/dunlei_cheng/2

Supplementary Material for ROC paper.doc (58 kB)
supplementary material

roc one GS test main file.txt (1 kB)
one GS main file

roc one GS test.txt (1 kB)
one GS model file

roc two NGS tests main file.txt (3 kB)
two NGS main file

roc two NGS tests.txt (1 kB)
two NGS model file