Conference Proceedings

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Pyroprinting Sensitivity Analysis on the GPU (with Douglas Brandt, Aldrin Montana, Bob Somers, Alex Dekhtyar, Christopher Lupo, Michael Black, and Anya Goodman), 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops Proceedings: Philadelphia, PA (2012)

Microbial Source Tracking (MST) is a field in which microbial strains are identified and associated...

 

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Biodegradation and Toxicity of Hydrocarbons along Vertical Transects in a Groundwater Plume (with Yarrow M. Nelson, Andrew Lassen, Paul Lundegrad, and Gonzalo Garcia), Proceedings of the 5th International Conference on Remediation of Chlorinated Recalcitrant Compounds: Monterey, CA (2006)

Abstract of paper presented at conference.

 

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Weathering Effects on Biodegradation and Toxicity of Hydrocarbons in Groundwater (with Marie G. Dreyer and Yarrow M. Nelson), Proceedings of the 8th International Conference on In Situ and On-Site Bioremediation: Baltimore, MD (2005)

This study examined the effect of weathering on hydrocarbon biodegradation and toxicity at a former...

 

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Microbial Activity of Soil Following Steam Treatment (with Barbara Orchard, Yarrow M. Nelson, Lynne Maloney, and Paul Lundegard), Proceedings of the 8th International Conference on In Situ and On-Site Bioremediation: Baltimore, MD (2005)

The effect of steam treatment on subsurface aerobic and anaerobic microbial communities was investigated using...

 

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Characterization of Aerobic and Anaerobic Microbial Activity in Hydrocarbon-Contaminated Soil (with Lynne C. Maloney and Yarrow M. Nelson), Proceedings of the Fourth International Conference on Remediation of Chlorinated and Recalcitrant Compounds: Monterey, CA (2004)

Microbial activity in hydrocarbon-contaminated soil was characterized and quantified to determine the potential for natural...

 

Articles

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Distinct Microbiome in Pouchitis Compared to Healthy Pouches in Ulcerative Colitis and Familial Adenomatous Polyposis (with Garrett C. Zella, Elizabeth J. Hait, Tiffany Glavan, Dirk Gevers, Doyle V. Ward, and Joshua R. Korzenik), Inflammatory Bowel Diseases (2011)

Background: Pouchitis occurs in up to 50% of patients with ulcerative colitis (UC) undergoing ileal...

 

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Pismo Beach Fecal Contamination Source Identification Study: Final Report (with Michael W. Black, Mark M. Moline, Marie Yeung, Alice K. Hamrick, Ian C. Robbins, Andrew A. Schaffner, and Nathania I. Boutet), Biological Sciences (2010)
 

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Analysis of Treatment Effects on the Microbial Ecology of the Human Intestine (with Anna L. Engelbrektson, Joshua R. Korzenik, Mary Ellen Sanders, Brian G. Clement, Gregory Leyer, and Todd R. Klaenhammer), FEMS Microbiology Ecology FEMS Microbiology Ecology (2006)

A large number of studies have investigated gastrointestinal microbiota and changes in the gastrointestinal community....

 

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Application of Genotypic and Phenotypic Analyses to Commercial Probiotic Strain Identity and Relatedness (with P. S. M. Yeung, P. S. Tong, and M. E. Sanders), Journal of Applied Microbiology (2004)

Aims: The objective of this study was to generate strain-specific genomic patterns of a bank...

 

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Application of Genotypic and Phenotypic Analyses to Commerical Probiotic Strain Identity and Relatedness (with P.S.M. Yeung, R. Cano, and P. Tong), Journal of Applied Microbiology (2004)

Aims: The objective of this study was to generate strain-specific genomic patterns of a bank...